{"id":751,"date":"2017-02-02T08:47:27","date_gmt":"2017-02-02T08:47:27","guid":{"rendered":"http:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/?p=751"},"modified":"2017-03-14T12:14:19","modified_gmt":"2017-03-14T12:14:19","slug":"visualising-data-in-3d","status":"publish","type":"post","link":"https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/visualising-data-in-3d\/","title":{"rendered":"Visualising data in 3D"},"content":{"rendered":"<p style=\"text-align: left\"><a href=\"http:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/map.png\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone size-medium wp-image-743\" src=\"http:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/map-300x169.png\" alt=\"Panama Heat Map\" width=\"300\" height=\"169\" srcset=\"https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/map-300x169.png 300w, https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/map-768x432.png 768w, https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/map.png 960w\" sizes=\"auto, (max-width: 300px) 100vw, 300px\" \/><\/a><\/p>\n<p style=\"text-align: left\">Our project (run within the <a href=\"http:\/\/blogs-new.it.ox.ac.uk\/acit-rs-team\/\">Research Technology Consultancy in IT Services<\/a>) looked at ways that IT Services could improve its support for managing and visualising 3D datasets generated by research here at Oxford. There are powerful free tools out there (for example\u00a0<a href=\"https:\/\/www.blender.org\/\">Blender<\/a> and <a href=\"https:\/\/threejs.org\/\">three.js<\/a>) both for offline and interactive rendering of this kind of data, but they tend not to work natively with the kind of data our research generates. Our project, along with the <a href=\"http:\/\/idn.web.ox.ac.uk\/home\">Live Data project<\/a>\u00a0looked at innovative ways to make datasets accessible to a wider audience, and make that access more impactful.<\/p>\n<p style=\"text-align: left\"><a href=\"http:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/potree.png\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone size-medium wp-image-746\" src=\"http:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/potree-300x216.png\" alt=\"potree\" width=\"300\" height=\"216\" srcset=\"https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/potree-300x216.png 300w, https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/potree-768x554.png 768w, https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/potree-1024x738.png 1024w, https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/potree.png 1276w\" sizes=\"auto, (max-width: 300px) 100vw, 300px\" \/><\/a><\/p>\n<p style=\"text-align: left\"><!--more-->To achieve this for 3D data, we needed to gain skills in using the tools in question, as well as writing scripts to convert the data into formats the tools could use. Tools like <a href=\"http:\/\/potree.org\/\">potree<\/a>\u00a0(above) provide\u00a0strong visualisation tools right in the browser using <a href=\"https:\/\/en.wikipedia.org\/wiki\/WebGL\">webgl<\/a> and\u00a0require only minimal adaptation of the data to provide good results. In other cases, we had to do more of the heavy lifting in our own scripting, as in this example from as yest unpublished research that provided tools to animate and examine a physical process in the browser:<\/p>\n<p style=\"text-align: left\"><a href=\"http:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/molecule.png\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone size-medium wp-image-749\" src=\"http:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/molecule-300x186.png\" alt=\"molecule\" width=\"300\" height=\"186\" srcset=\"https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/molecule-300x186.png 300w, https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/molecule-768x477.png 768w, https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/molecule.png 1004w\" sizes=\"auto, (max-width: 300px) 100vw, 300px\" \/><\/a><\/p>\n<p style=\"text-align: left\">Using the free\/open source 3D modelling and rendering tool Blender, we wrote scripts to convert research data generated by <a href=\"https:\/\/en.wikipedia.org\/wiki\/Lidar\">LIDAR<\/a> scanners and bespoke physical simulations (via <a href=\"http:\/\/www.paraview.org\/\">Paraview<\/a>). At the same time we introduced and iterated on an <a href=\"https:\/\/www.it.ox.ac.uk\/do\/training-and-facilities\/itlc-courses\">ITLC<\/a>\u00a0course in the use of Blender. This not only helps researchers gain skills in using the software, it helps us identify needs in the research community at Oxford.<\/p>\n<p style=\"text-align: left\"><a href=\"http:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/pointcloud.png\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone size-medium wp-image-750\" src=\"http:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/pointcloud-300x247.png\" alt=\"pointcloud\" width=\"300\" height=\"247\" srcset=\"https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/pointcloud-300x247.png 300w, https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/pointcloud-768x631.png 768w, https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/pointcloud.png 876w\" sizes=\"auto, (max-width: 300px) 100vw, 300px\" \/><\/a><\/p>\n<p style=\"text-align: left\">We also held an extremely well attended (and well reviewed) <a href=\"http:\/\/idn.web.ox.ac.uk\/event\/data-visualisation-and-future-academic-publishing\">event<\/a>\u00a0to discuss all aspects of Data Visualisation and how it fits into the future of academic publication.\u00a0<a href=\"http:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/Data-visualisation-and-the-future-of-academic-publishing.png\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone size-medium wp-image-754\" src=\"http:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/Data-visualisation-and-the-future-of-academic-publishing-300x150.png\" alt=\"Data visualisation and the future of academic publishing\" width=\"300\" height=\"150\" srcset=\"https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/Data-visualisation-and-the-future-of-academic-publishing-300x150.png 300w, https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/Data-visualisation-and-the-future-of-academic-publishing-768x384.png 768w, https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/Data-visualisation-and-the-future-of-academic-publishing.png 800w\" sizes=\"auto, (max-width: 300px) 100vw, 300px\" \/><\/a><\/p>\n<p style=\"text-align: left\"><a href=\"http:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/event2.png\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone size-medium wp-image-748\" src=\"http:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/event2-300x225.png\" alt=\"event2\" width=\"300\" height=\"225\" srcset=\"https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/event2-300x225.png 300w, https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/event2-768x576.png 768w, https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/event2-1024x768.png 1024w, https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/event2.png 1280w\" sizes=\"auto, (max-width: 300px) 100vw, 300px\" \/><\/a><\/p>\n<p style=\"text-align: left\"><a href=\"http:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/event1.png\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone size-medium wp-image-742\" src=\"http:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/event1-300x208.png\" alt=\"event1\" width=\"300\" height=\"208\" srcset=\"https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/event1-300x208.png 300w, https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/event1-768x532.png 768w, https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/event1-1024x710.png 1024w, https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/files\/2017\/01\/event1.png 1280w\" sizes=\"auto, (max-width: 300px) 100vw, 300px\" \/><\/a><\/p>\n<p style=\"text-align: left\">Looking forward, we intend to make 3D data visualisation into one of the topics on which we can provide support to researchers as part of the <a href=\"http:\/\/idn.web.ox.ac.uk\/home\">Interactive Data Network<\/a>. We also received strong support for the idea of further data visualisation events held in Oxford, with a greater focus on practical wrangling of datasets into interactive visual forms. We hope to announce a further event in the near future.<\/p>\n<p style=\"text-align: left\">\n","protected":false},"excerpt":{"rendered":"<p>Our project (run within the Research Technology Consultancy in IT Services) looked at ways that IT Services could improve its support for managing and visualising 3D datasets generated by research here at Oxford. There are powerful free tools out there &hellip; <a href=\"https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/visualising-data-in-3d\/\">Continue reading <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":26,"featured_media":0,"comment_status":"open","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[41662,332],"tags":[36446,4336,41666],"class_list":["post-751","post","type-post","status-publish","format-standard","hentry","category-completed-projects","category-projects","tag-3d","tag-blender","tag-visualisation"],"_links":{"self":[{"href":"https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/wp-json\/wp\/v2\/posts\/751","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/wp-json\/wp\/v2\/users\/26"}],"replies":[{"embeddable":true,"href":"https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/wp-json\/wp\/v2\/comments?post=751"}],"version-history":[{"count":6,"href":"https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/wp-json\/wp\/v2\/posts\/751\/revisions"}],"predecessor-version":[{"id":835,"href":"https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/wp-json\/wp\/v2\/posts\/751\/revisions\/835"}],"wp:attachment":[{"href":"https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/wp-json\/wp\/v2\/media?parent=751"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/wp-json\/wp\/v2\/categories?post=751"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/blogs-new.it.ox.ac.uk\/innovation-challenges\/wp-json\/wp\/v2\/tags?post=751"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}